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Table 3 List of the top genes associated with the GGH-specific altered expression in the GGH-modulated MDA-MB-435 breast cancer cells

From: γ-Glutamyl hydrolase modulation significantly influences global and gene-specific DNA methylation and gene expression in human colon and breast cancer cells

Gene symbol

Fold change (vs. control)

Description

Accession

GGH overexpression

GGH inhibition

Downregulated in GGH overexpression and upregulated in GGH inhibition

SPP1*

−4.51

5.88

Secreted phosphoprotein 1

NM_001040058.1

PRSS7*

−1.94

4.66

Protease, serine, 7 (enterokinase)

NM_002772.1

TYR

−31.95§

4.07

Tyrosinase (oculocutaneous albinism IA)

NM_000372.4

CYB5R2

−1.34

3.05

Cytochrome b5 reductase 2

NM_016229.3

BCHE*

−4.82

2.31§

Butyrylcholinesterase

NM_000055.2

ADM

−2.63

2.31

Adrenomedullin

NM_001124.1

TMEM166

−3.05

2.07

Transmembrane protein 166

NM_032181.1

ORC5L

−1.35

2.07

Origin recognition complex, subunit 5-like (yeast)

NM_002553.2

PNLIPRP3

−1.34

2.05

Pancreatic lipase-related protein 3

NM_001011709.1

DYNC1I1

−5.83

2.03

Dynein, cytoplasmic 1, intermediate chain 1

NM_004411.3

Upregulated in GGH overexpression and downregulated in GGH inhibition

CTHRC1*

1.77

−4.44§

Collagen triple helix repeat containing 1

NM_138455.2

NNMT

4.80§

−3.24

Nicotinamide N-methyltransferase

NM_006169.2

HLA-DOA

1.44

−3.09

Major histocompatibility complex, class II, DO alpha

NM_002119.3

FSCN1

3.31

−3.03

Fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)

NM_003088.2

CDC42EP5

3.76§

−2.53§

CDC42 effector protein (Rho GTPase binding) 5

NM_145057.2

CHN1

2.79§

−2.30

Chimerin (chimaerin) 1

NM_001025201.1

SLC2A3

1.94

−2.24

Solute carrier family 2 (facilitated glucose transporter), member 3

NM_006931.1

HLA-DRB6

2.91

−2.20

Major histocompatibility complex, class II, DR beta 6 (pseudogene)

NR_001298.1

HLA-DQA1

6.26

−2.19

PREDICTED: major histocompatibility complex, class II, DQ alpha 1, transcript variant 10

XM_936128.2

PHF21A

1.75

−2.11

PHD finger protein 21A

NM_016621.2

C21orf34

1.39

−2.11

Chromosome 21 open reading frame 34

NM_001005734.1

S100A4*

13.13§

−2.10

S100 calcium-binding protein A4

NM_019554.2

  1. * A given gene is represented in the microarray set with multiple identifiers; § Expression of gene was regulated by DNA methylation