Table 1 Characteristics of the SNPs used for the causality from continuous coffee consumption on periodontitis. SNP, single nucleotide polymorphism; EAF, effect allele frequency; SE, standard error
From: Coffee consumption and periodontitis: a Mendelian Randomization study
| Â | Continuous coffee consumption (Exposure) | Periodontitis (Outcome) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNP | Effect Allele | Other Allele | EAF | Beta | SE | P-value | Sample size | EAF | Beta | SE | P-value | Sample size |
rs1057868 | T | C | 0.29 | 1.4036 | 0.4 | 5.26E-33 | 375,833 | NA | 0.0063 | 0.017 | 0.71 | 49,066 |
rs1956218 | G | A | 0.56 | 0.9055 | 0.3873 | 3.62E-08 | NA | 0.0198 | 0.0157 | 0.21 | ||
rs2472297 | T | C | 0.27 | 2.1307 | 0.4123 | 5.19E-155 | NA | 0.0138 | 0.0204 | 0.50 | ||
rs4410790 | C | T | 0.63 | 1.9849 | 0.3873 | 5.59E-141 | NA | 0.0214 | 0.0159 | 0.18 | ||
rs4719497 | T | C | 0.87 | 1.0954 | 0.4690 | 4.23E-08 | NA | 0.0029 | 0.0223 | 0.90 | ||
rs574367 | T | G | 0.21 | 1.0247 | 0.4243 | 8.06E-09 | NA | 0.0284 | 0.0194 | 0.14 | ||
rs66723169 | A | C | 0.23 | 1.2124 | 0.4243 | 9.88E-17 | NA | 0.0087 | 0.0195 | 0.66 | ||
rs73073176 | C | T | 0.87 | 1.5199 | 0.4690 | 5.56E-25 | NA | 0.0246 | 0.0253 | 0.33 | ||