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Table 3 Loci associated with genetic variability according to GTEx consortium in all human tissues available and human kidney eQTL meta-analysis

From: Genome-wide association study of serum magnesium in type 2 diabetes

SNP

chr

Location

Coded

Linked gene1

NES1

P1

Linked gene2

Beta2

STD2

P2

rs11264341

1

155151493

C>T

GBAP1

− 0.404

2.0E-30

MUC1

0.176

0.024

1.7E−13

rs10019833

4

77357592

T>C

FAM47E

− 0.324

2.1E-27

STBD1

0.207

0.041

5.5E−7

rs2270860

6

43270151

C>T

SLC22A7

− 0.313

2.5E-17

CRIP3

0.221

0.050

1.1E−5

  1. GTEx = genotype-tissue expression, Mg2+ = magnesium ion, NES = normalized affect size, STD = standard deviation
  2. 1eQTL looked up in the GTEx consortium [28]
  3. 2Data was retrieved from https://susztaklab.com/Kidney_eQTL/pub.php [24]
  4. 3Beta is reported with respect to the alternate allele
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Genes & Nutrition

ISSN: 1865-3499

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