- Research Paper
- Open Access
Nrf2 target genes are induced under marginal selenium-deficiency
Genes & Nutrition volume 5, pages297–307(2010)
A suboptimal selenium supply appears to prevail in Europe. The current study, therefore, was focused on the changes in gene expression under a suboptimal selenium intake. Previous microarray analyses in the colon of mice fed either a selenium-adequate or a moderately deficient diet revealed a change in genes of several pathways. Severe selenium-deficiency has been found previously to influence Nrf2-regulated genes of the adaptive response. Since the previous pathway analyses were done with a program not searching for Nrf2 target genes, respective genes were manually selected and confirmed by qPCR. qPCR revealed an induction of phase II (Nqo1, Gsts, Sult1b1 and Ugt1a6) and antioxidant enzymes (Hmox1, Mt2, Prdx1, Srxn1, Sod1 and Gclc) under the selenium-poor diet, which is considered to compensate for the loss of selenoproteins. The strongest effects were observed in the duodenum where preferentially genes for antioxidant enzymes were up-regulated. These also include the mRNA of the selenoproteins TrxR1 and GPx2 that would enable their immediate translation upon selenium refeeding. The down-regulation of Gsk3β in moderate selenium-deficiency observed in the previous paper provides a possible explanation for the activation of the Nrf2 pathway, because inhibition of GSK3β results in the nuclear accumulation of Nrf2.
In mammals, the essential trace element selenium exerts its function as selenocysteine incorporated into the active center of selenoproteins. In humans, 25 genes encode for selenoproteins . Many of these are involved in redox processes , including glutathione peroxidases (GPx)  and thioredoxin reductases (TrxR) . A marginal selenium-deficiency, as present in the European population, is possibly accompanied by a slightly increased oxidative status .
Expression of selenoproteins depends on the cellular selenium status. However, several microarray studies revealed that the expression of also non-selenoproteins is influenced by the availability of selenium (reviewed in ). Underlying mechanisms are still scarce. Genes often influenced by the selenium status code for enzymes of the antioxidant defense and the phase II system [13, 44]. On the one hand, large doses of selenium stimulate the activity of phase II enzymes like glutathione S-transferase (GST) and NADPH:quinone oxidoreductase (NQO1). This effect can be mediated by selenocysteine Se-conjugates  and dimethyl diselenide , respectively. On the other hand, there is strong evidence for an induction of antioxidant and phase II enzymes in selenium-deficiency. Already in the late 1970s, it was reported that heme oxygenase 1 (HMOX1)  as well as GST activity were elevated in selenium-deficient rat liver . The idea of a compensatory up-regulation of antioxidant and phase II enzymes in selenium-deficiency was further supported by findings in mice with an organ-specific targeted removal of the gene encoding for selenocysteine tRNA (Trsp). The complete loss of selenoproteins in liver resulted in the induction of GSTPi, NQO1 and HMOX1 .
Most of the genes for proteins involved in the cellular antioxidant defense and in phase II detoxification are regulated via the redox- and electrophile-sensitive transcription factor NF-E2-related factor (Nrf2) (reviewed in ), which binds to the cis-acting antioxidant or electrophilic response element (ARE/EpRE) [48, 56]. Nrf2−/− mice are sensitive to chemical-induced toxicity and tumorigenesis . Additionally, Nrf2−/− mice are highly susceptible to oxidative stress  and have a lower basal glutathione (GSH) level . Under unstimulated conditions, Nrf2 is kept in the cytosol bound to Keap1, which functions as a substrate adaptor for a Cul3-based E3 ubiquitin ligase and targets Nrf2 for degradation. Transactivation of target genes is induced in response to reactive oxygen species (ROS) or electrophilic agents that modify susceptible thiol groups of Keap1, resulting in a rapid increase in nuclear Nrf2 protein levels (reviewed in ). A simultaneous disruption of Trsp and Nrf2 abolished the induction of phase II enzymes, thus, verifying the role of Nrf2 in responding to the loss of selenoproteins . The ARE-driven reporter gene activity in ARE-reporter mice fed a selenium-deficient diet was strongly enhanced compared to mice fed the control diet . In addition, the increased GST and NQO1 activity observed in selenium-deficient wild type mice was not detectable in Nrf2−/− mice . This provided the first direct link between dietary selenium-deficiency and Nrf2 activation.
Based on these results, the current study was focused on the influence of a marginal selenium-deficient diet on the expression of Nrf2-regulated genes. The selenium-poor diet contained half the recommended daily allowance (RDA) of mice , reflecting a physiological situation which can equally occur by changing nutritional habits or by seasonal food variation. The target organs analyzed were the intestinal sections colon and duodenum, the first line of defense against xenobiotic stress, as well as liver, which highly expresses phase II enzymes. Pathway analysis of the microarray data obtained in the previous study  did not indicate the Nrf2 pathway as being affected since the used program GenMAPP does not include a MAPP (microarray pathway profile) for this pathway. Therefore, 48 Nrf2 target genes and 12 classical phase II enzymes were manually identified, and interesting candidate genes were confirmed by qPCR.
Materials and methods
Tissue samples were obtained from the animals treated as reported previously . Briefly, male C57BL/6 J mice (3–4 weeks of age) were fed either a selenium-poor (0.086 mg Se/kg) or a selenium-adequate diet (0.15 mg Se/kg) produced by mixing selenomethionine (Acros, Geel, Belgium) into the poor one (Altromin, Lage, Germany). After a 6-week feeding period, anesthetized animals were killed by cervical dislocation. Plasma and tissues freeze-clamped in liquid nitrogen were stored at −80°C. The selenium status of the 12 animals per group was characterized by the plasma selenium content and liver GPx activity and found to be decreased under moderate selenium-deficiency to 13 and 35% of selenium-adequacy, respectively .
Tissue was ground under cooling with liquid nitrogen. 20–30 mg powder was suspended in 800 μl of cold Trizol (Invitrogen, Karlsruhe, Germany) and homogenized with a tissue lyzer (Qiagen, Hilden, Germany) for 2 × 2 min at 30 Hz. RNA was isolated using the Trizol protocol according to the manufacturer’s instructions. Genomic DNA was digested with 10 U RQ1 DNase (Promega, Mannheim, Germany), and RNA was cleaned up by phenol–chloroform extraction. RNA concentrations were measured using a NanoDrop ND-1000 (Peqlab Biotechnologie GmbH, Erlangen, Germany).
The microarray analysis using Mouse 44 K microarrays (Agilent Technologies, Böblingen, Germany) was done as described previously . Significantly regulated genes were identified with Student’s t-test (P < 0.05).
Quantitative real-time PCR
RNA (3 μg) was reversely transcribed with 150 fmol oligo(dT)15 primers and 180 U Moloney murine leukemia virus reverse transcriptase (Promega) in a total volume of 45 μl. Real-time PCRs (Mx3005PTM QPCR System, Stratagene, Amsterdam, Netherlands) were performed in triplicates with 1 μl of tenfold diluted cDNA in 25-μl reaction mixtures using SYBR Green I (Molecular Probes, Eugene, USA) as fluorescent reporter. The annealing temperature was 60 and 62°C, respectively, for all PCR reactions (Table 1). PCR products were quantified with a standard curve ranging from 1 × 103 to 1 × 109 copies of each amplicon. Primers (Table 1, Sigma–Aldrich, Taufkirchen, Germany) were designed to be specific for cDNA by placing at least one primer onto an exon/intron boundary with PerlPrimer v1.1.14. The mean of the reference genes Rpl13a and Hprt1 was used for normalization of qPCR results in the colon and liver, whereas Rpl13a was used solely in the duodenum.
Preparation of tissue lysates
10 mg of ground tissue was suspended in 250-μl homogenization buffer (100 mM Tris-HCl, 300 mM KCl, 0.01% Triton X-100) containing 2 μl of protease inhibitor cocktail III (Calbiochem, Bad Soden, Germany) and homogenized with a tissue lyzer (Qiagen) for 2 × 2 min at 30 Hz. Lysates were centrifuged for 15 min at 21,000×g and 4°C before protein content was assessed according to Bradford .
Aliquots (20 μg protein/lane) were subjected to SDS-PAGE and blots performed as described . NQO1 was detected with the rabbit-anti-human NQO1 antiserum (1:3,000; ab34173, Abcam, Cambridge, UK). β-Actin, detected by rabbit-anti-human β-actin antiserum (1:5,000; ab8229, Abcam), served as internal control. Peroxidase-conjugated anti-rabbit antibody (1:50,000; Chemicon, Hofheim, Germany) was used as secondary antibody. Detection was achieved in a Fuji LAS3000-CCD system with Supersignal West Dura (Perbio, Bonn, Germany) as substrate. Bands were quantified with the Aida/2D densitometry 4.0 software (Raytest, Straubenhardt, Germany).
Dicoumarol-sensitive NQO1 activity was measured according to . Reduction in 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) mediated by menadione was followed on a microtiter plate absorbance reader at 590 nm (Synergy 2, Biotek Instruments GmbH, Bad Friedrichshall, Germany) that corrects different filling levels to 1-cm path length. 3 μl lysate was used for the assay together with 190-μl reaction buffer (25 mM Tris-HCl, pH 7.4, 0.665 mg/l BSA, 0.01% Tween 20, 5 μM FAD, 1 mM glucose-6-phosphate, 30 μM NADP, 0.72 mM MTT, 0.3 U/ml glucose-6-phosphate dehydrogenase, 50 μM menadione) in a total volume of 250 μl. Activity of NQO1 was calculated as the difference between the rates of MTT reduction with and without dicoumarol using an extinction coefficient of reduced MTT estimated to be 11,961 (mol/l)−1 × cm−1 at 590 nm.
Comparing two groups, significant differences were calculated by an unpaired Student’s t-test (GraphPad Prism® version 5.0, San Diego, CA, USA). A P-value of <0.05 was regarded as statistically significant.
Nrf2 target genes respond to selenium supply in the intestine of mice
Microarray analysis revealed that 48 known Nrf2 targets were expressed more than twofold above the background in the colon of mice (Table 2, genes with reference). In addition, 12 classical phase II enzymes but not yet characterized as Nrf2 target genes (in Table 2 without reference) were included in the analysis presented in Table 2, which were up-regulated in marginal selenium-deficiency. Of these 60 genes, 41 were up-regulated (FC > 1.1 indicated in bold in Table 2) in marginal selenium-deficiency, whereas 9 were down-regulated (FC < 0.9). The rest was not affected. Nineteen genes for which names are marked bold (Table 2) were analyzed by qPCR. They were either chosen to cover the main enzyme families summarized as phase II enzymes or as typical Nrf2 target genes known from the literature. According to qPCR, 14 genes were significantly regulated in the colon by the selenium supply (Figs. 1, 2 and 3), while 5 genes were unaffected (data not shown). Up-regulation of genes of the antioxidant defense like Hmox1, Mt2, Prdx1, Srxn1, Sod1 and Gclc could be confirmed in the colon (Fig. 1). Expression levels were also analyzed in duodenum as absorption of selenomethionine mainly takes place in the proximal part of the gastrointestinal tract . In fact, except for Mt2, up-regulation in marginal selenium-deficiency was stronger in the duodenum than in the colon, but effects were less significant due to a higher inter-individual variance. Also the six classical phase II enzymes Nqo1, Gsta1/a2, Gstm1, Gstp1, Sult1b1 and Ugt1a6 were up-regulated in selenium-poor colon (Fig. 2). In the duodenum, however, only a trend was observed for Nqo1 and Sult1b1. None of the analyzed genes were changed by the selenium supply in the liver, except Hmox1, which was, in contrast to the intestine, down-regulated in selenium-poor liver (Table 3).
The two Nrf2 selenoprotein target genes, GPx2 and TrxR1, are special cases because their translation depends on selenium availability and their ranking in the hierarchy. The mRNA of both high-ranking selenoproteins GPx2  and TrxR1  was significantly reduced in selenium-poor colon with GPx2 being less affected than TrxR1. In contrast, mRNA of both enzymes was enhanced in selenium-poor duodenum (Fig. 3a, b). Up-regulation of GPx2 mRNA in selenium-deficiency was already shown in cell culture . The stability of the mRNA under limiting selenium conditions enabled rapid re-synthesis of GPx2 in the selenium-deficient cells upon repletion of selenium . Both observations can be taken as proof for the high ranking of GPx2 in the hierarchy of selenoproteins. The expression of Sepw1, which is not regulated by Nrf2, is down-regulated in the duodenum and colon in accordance with its low ranking in the hierarchy (Fig. 3c).
Up-regulation of NQO1 RNA in selenium-deficient duodenum correlates with NQO1 protein expression and activity
NQO1 as prototype of Nrf2 target genes was further analyzed at the protein and activity level. In duodenum both, NQO1 protein and activity, were significantly enhanced in the selenium-poor group (Fig. 4), correlating with the enhanced mRNA (Fig. 2a). In the colon, neither protein levels nor activity were changed, indicating that the slight increase of NQO1 mRNA is not reflected by an increased translation and activity.
The present study is part of an animal experiment in which mice were fed a selenium-adequate diet meeting the RDA for mice or a diet in which the selenium content was reduced to about 50% . Although the selenium intake was only moderately reduced, the RNA expression of four selenoproteins, SelW, GPx1, SelH and SelM, was distinctly down-regulated and genes of the Wnt pathway were up-regulated in the colon . A manual analysis of the microarray data revealed that also Nrf2 target genes and phase II enzymes were regulated by the selenium status; out of 60 genes expressed in the colon, 41 were up-regulated accounting for 68% (Table 2). The expression of 12 selected genes for antioxidant defense and phase II enzymes was confirmed by qPCR (Figs. 1 and 2). The consistent up-regulation of Nrf2 target genes in marginal selenium-deficiency is highly relevant since a suboptimal selenium supply may also result from a low selenium diet often consumed by humans . The establishment of a marginal selenium-deficiency is in contrast to most of the other studies investigating the effects of either high selenium supplementation or severe selenium-deficiency.
Also Burk and colleagues, who provided the first direct link between dietary selenium-deficiency and Nrf2 activation, compared mice fed either a completely selenium-deficient or a -supplemented diet with 0.25 mg sodium selenite per kg . Under selenium-deficient conditions, ARE-driven reporter gene activity as well as GST and NQO1 activity were strongly increased in the liver of wild-type mice but were unchanged in Nrf2−/− mice. The current study revealed that already a marginal selenium-deficiency can lead to an up-regulation of phase II enzymes underscoring how sensitive organisms are to changes in selenium homeostasis.
As Nrf2 target gene expression was unaffected by a marginal selenium-deficiency in the liver (Table 3), but up-regulated in the intestine, it can be concluded that the intestine reacts more sensitively to a reduced selenium supply. In the liver of Nrf2−/− mice, most of the known Nrf2 target genes were down-regulated, whereas mainly enzymes for detoxification were increased in Keap1 knockdown mice characterized by an increased Nrf2 activation . The authors conclude that the hepatic activation of Nrf2 is more important for detoxification than for antioxidant defense. In the current study, a distinct up-regulation of enzymes for the antioxidant defense was observed in the duodenum. Since a reduced redox state maintains intestinal epithelial cell proliferation and prevents pre-mature apoptosis , a higher need for enzymes of the antioxidant defense can explain the present findings.
However, also contrary findings have been reported: Detoxifying genes were down-regulated by selenium-deficiency when feeding 0.01 mg selenium/kg diet or 1 mg/kg . Thus, the selenium content differed by a factor of 100, whereas in the present study the factor was only 2. The conflicting results (reviewed in ) can be explained by the fact that a supranutritional diet can induce phase II enzymes much more efficiently than selenium-deficiency can do. Taking the supranutritional diet as reference for the deficient one, the net effect is a down-regulation in selenium-deficiency.
Underlying mechanisms for the effects of low and high selenium content appear to be different. High concentrations of certain selenium compounds or metabolites may directly activate the Nrf2 pathway by modifying critical thiols in Keap1. Reactive thiol groups can also be modified by oxidation [22, 29] a situation which prevails in selenium-deficiency [52, 55]. Whether a higher oxidative status in the moderately selenium-deficient mice was responsible for the induced Nrf2 target gene expression needs to be clarified.
The complete loss of all selenoproteins by the knockout of the gene for the Sec-specific tRNA (Trsp) in hepatocytes enhanced the expression of several phase II enzymes, indicating that at least one selenoprotein normally suppresses the activation of the Nrf2 pathway . To lower the number of putative candidates, Sengupta and colleagues used a second mouse strain in which Trsp was mutated in a way that only housekeeping but not stress-related selenoproteins were expressed. These mice did not respond with a compensatory up-regulation of phase II enzymes, indicating that a housekeeping selenoprotein must prevent Nrf2 activation . Since the thioredoxin reductase family belongs to the housekeeping selenoproteins , a liver-specific TrxR1 knockout was analyzed for potential activation of the Nrf2 pathway. Indeed, the TrxR1 knockout resulted in both, the nuclear accumulation of Nrf2 and the induction of 21 Nrf2 target genes . mRNA levels of TrxR2, TrxR3 or thioredoxin were unaffected. Thus, TrxR1 appears to counteract Nrf2 activation and/or serves as a turn-off signal for Nrf2 activation. However, TrxR1-deficient livers did not show evidence of oxidative stress, leaving the underlying mechanism unclear .
Selenium also influences the expression of multiple genes coding for non-selenoproteins, which might be involved in the specific activation of the Nrf2 pathway under marginal selenium-deficiency. In the previous study , we found the Wnt pathway activated, indicated by the enhanced expression of β-catenin, Dvl2, Lef1 and c-Myc and the down-regulation of Gsk3β. GSK3β, a multifunctional serine/threonine kinase, is not only involved in glycogen metabolism and canonical Wnt signaling but has also been shown to inactivate the Nrf2 pathway [23, 49]. Fyn kinase is phosphorylated and thereby activated by GSK3β. Phospho-Fyn, in turn, phosphorylates Nrf2 resulting in the nuclear export of Nrf2 . The reduced activity of GSK3β, which may be deduced from the down-regulation of Gsk3β under selenium-limiting conditions in the previous study, might lower the amount of active Fyn resulting in nuclear accumulation of Nrf2.
The activation of the Nrf2 pathway in marginal selenium-deficiency is relevant in terms of colorectal cancer development. In a model of inflammation-triggered colorectal carcinogenesis, Nrf2−/− mice showed an increased incidence, multiplicity and tumor size compared to wild type mice . On the one hand, phase II enzymes like the GST, SULT and UGT family are involved in the conjugation and excretion of xenobiotic substances. Together with the up-regulation of genes for antioxidant enzymes like peroxiredoxins, sulfiredoxin, Sod1, Hmox1 and metallothionein, the organism is protected from oxidative damage. On the other hand, the Nrf2 activation may also contribute to an increased drug export, to drug resistance and to tumor cell survival [16, 31]. Therefore, the consequence of an up-regulation of Nrf2 target genes for colorectal cancer in selenium-deficiency can not be easily defined. The activation of the Wnt pathway in selenium-deficiency points to a cancer-promoting function of a low-selenium status and is in accordance with the higher cancer incidence in selenium-deficiency (reviewed in ). Whether the activation of the Nrf2 pathway is the attempt to compensate for the loss of selenoproteins with the strengthening of the endogenous defense system or whether it already contributes to survival of cancer cells is a challenge for further investigations.
Heme oxygenase 1
Gene encoding for selenocysteine tRNA
Antioxidant or electrophilic response element
Reactive oxygen species
Recommended daily allowance
- TrxR (Txnrd):
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We thank Stefanie Deubel for excellent technical assistance and the team of the animal facilities, especially Elke Thom and Swetlana König. Evert van Schothorst and Jaap Keijer (Human and Animal Physiology, Wageningen University, The Netherlands) are acknowledged for their help in performing the microarray analysis. The work was financially supported by the European Nutrigenomics Organisation (NUGO) and the German Research Council (DFG), grant Br778/8-1.
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Müller, M., Banning, A., Brigelius-Flohé, R. et al. Nrf2 target genes are induced under marginal selenium-deficiency. Genes Nutr 5, 297–307 (2010) doi:10.1007/s12263-010-0168-8
- Phase II enzyme
- Oxidative stress